diplomat sleap tweak_videos

Summary

Make minor modifications and tweaks to sleap results (stored in .slp files) using DIPLOMAT’s supervised UI.

Usage

diplomat sleap tweak_videos [-h] --config FILE --videos
                                   [FILE, ...]|FILE [--pcutoff FLOAT]
                                   [--dotsize INT] [--alphavalue FLOAT]
                                   [--colormap TO_COLORMAP]
                                   [--shape_list [STR, ...]]
                                   [--line_thickness INT]
                                   [--skeleton [[STR, STR], ...]|{STR: [STR, ...], ...}|[STR, ...]|NONE|BOOL]

Options

usage: diplomat sleap tweak_videos [-h] --config FILE --videos
                                   [FILE, ...]|FILE [--pcutoff FLOAT]
                                   [--dotsize INT] [--alphavalue FLOAT]
                                   [--colormap TO_COLORMAP]
                                   [--shape_list [STR, ...]]
                                   [--line_thickness INT]
                                   [--skeleton [[STR, STR], ...]|{STR: [STR, ...], ...}|[STR, ...]|NONE|BOOL]

Make minor modifications and tweaks to sleap results (stored in .slp files)
using DIPLOMAT's supervised UI.

optional arguments:
  -h, --help            show this help message and exit
  --config FILE, -c FILE
                        The path (or list of paths) to the sleap model(s) used
                        for inference, each as either as a folder or zip file.
  --videos [FILE, ...]|FILE, -v [FILE, ...]|FILE
                        Paths to the sleap label files, or .slp files, to make
                        minor modifications to, NOT the video files.
  --pcutoff FLOAT       The probability to cutoff results below.
  --dotsize INT         The size of the dots.
  --alphavalue FLOAT    The alpha value of the dots.
  --colormap TO_COLORMAP
                        The colormap to use for tracked points in the video.
                        Can be a matplotlib colormap or a list of matplotlib
                        colors.
  --shape_list [STR, ...]
                        A list of shape names, shapes to use for drawing each
                        individual's dots.
  --line_thickness INT  Thickness of lines drawn.
  --skeleton [[STR, STR], ...]|{STR: [STR, ...], ...}|[STR, ...]|NONE|BOOL
                        The skeleton to use for this this run of DIPLOMAT.
                        Defaults to None, which uses the skeleton associated
                        with the sleap project. Can be a list of strings, a
                        list of tuples of strings, a dictionary of strings to
                        strings or lists of strings, or True/False (True
                        connects all parts, False connects no parts, disabling
                        the skeleton).